Exploring membrane vesicles in citrus fruits: a comparative analysis of conventional and organic farming approaches.

BACKGROUND: Recently, vesicles derived from plant cell membranes have received attention for their potential use as active biomolecules and nanocarriers, and obtaining them from organic crops may be an interesting option because different farming systems can affect production, plant secondary metabolism and biochemistry of cell membranes. The present study aimed to determine how organic and conventional farming affects the mineral nutrition, gas exchange, CO2 fixation and biochemical composition of lemon fruits, which could have an impact on the different fractions of cell membranes in pulp and juice. RESULTS: Organic trees had higher intrinsic water use efficiency (WUEi) but conventional trees had higher stomatal conductance (gs) and nitrogen use efficiency (NUtE). Also, organic lemons had significantly higher levels of some micronutrients (Ca, Cu, Fe and Zn). Second, the main differences in the membrane vesicles showed that organic pulp vesicles had a higher antioxidant activity and more oleic acid, whereas both types of vesicles from conventional lemons had more linoleic acid. CONCLUSION: In conclusion, organic farming did not alter carbon fixation parameters but impacted nitrogen fixation and water uptake, and resulted in higher micronutrient levels in lemons. These mineral nutritional changes could be related to the higher production of membranes that showed suitable morphological traits and a high antioxidant activity, positively correlated with a high amount of oleic acid, which could have stronger cell protection characteristics. © 2023 The Authors. Journal of The Science of Food and Agriculture published by John Wiley & Sons Ltd on behalf of Society of Chemical Industry.

Role of Fungi in Imparting General Disease Suppressiveness in Soil from Organic Field.

Soil microbial communities are key players responsible for imparting suppressive potential to the soil against soil-borne phytopathogens. Fungi have an immense potential to inhibit soil-borne phytopathogens, but the fungal counterpart has been less explored in this context. We assessed the composition of fungal communities in soil under long-term organic and conventional farming practice, and control soil. The disease-suppressive potential of organic field was already established. A comparative analysis of the disease suppressiveness contributed by the fungal component of soil from conventional and organic farms was assessed using dual culture assays. The quantification of biocontrol markers and total fungi was done; the characterization of fungal community was carried out using ITS-based amplicon sequencing. Soil from organic field exhibited higher disease-suppressive potential than that from conventional farming, against the pathogens selected for the study. Higher levels of hydrolytic enzymes such as chitinase and cellulase, and siderophore production were observed in soil from the organic field compared to the conventional field. Differences in community composition were observed under conventional and organic farming, with soil from organic field exhibiting specific enrichment of key biocontrol fungal genera. The fungal alpha diversity was lower in soil from the organic field compared to the conventional field. Our results highlight the role of fungi in contributing to general disease-suppressive ability of the soil against phytopathogens. The identification of fungal taxa specifically associated with organic farming can aid in understanding the mechanism of disease suppression under such a practice, and can be exploited to induce general disease suppressiveness in otherwise conducive soil.

The spatial influences of organic farming and environmental heterogeneity on biodiversity in South Australian landscapes.

The potential link between certified organic farming and biodiversity and conservation remains unexplored in Australia, despite the country having the world's largest amount of certified organic farmland and unprecedented biodiversity loss. This study modelled the spatial effects of organic farming (intensity of local farming systems), environmental heterogeneity, and urbanisation on two widely studied environmental taxa - vascular plant and bird species richness (surrogate measures of biodiversity) - in South Australia, using a unique certified organic farming postcode level dataset from 2001 to 2016 (N = 5440). The spatial Durbin error model results confirmed the positive spatial congruence of organic farming with greater vascular plant species richness, whereas only weak to no significant evidence was found for bird species richness. Landscape features (habitat heterogeneity) and green vegetation (a proxy indicator of resource availability) - rather than organic farming - appeared to be most associated with bird species richness. Both plant and bird species richness were positively associated with habitat heterogeneity (land cover diversity and elevation range), plant productivity and proportion of conservation land and water bodies. Whereas, increased anthropogenic land use for cropping and horticultural farming, soil type diversity and proximity to the coast significantly reduced species richness of both taxa. The results suggest that a multi-scale spatially refined biodiversity conservation strategy, with spatial targeting that promotes low intensive farming systems and increases landscape heterogeneity to provide quality habitat (a whole of landscape approach by incorporating private agricultural landholders), could be beneficial for biodiversity conservation.

Soil microbial diversity and community composition during conversion from conventional to organic agriculture.

It is generally assumed that the dependence of conventional agriculture on artificial fertilizers and pesticides strongly impacts the environment, while organic agriculture relying more on microbial functioning may mitigate these impacts. However, it is not well known how microbial diversity and community composition change in conventionally managed farmers' fields that are converted to organic management. Here, we sequenced bacterial and fungal communities of 34 organic fields on sand and marine clay soils in a time series (chronosequence) covering 25 years of conversion. Nearby conventional fields were used as references. We found that community composition of bacteria and fungi differed between organic and conventionally managed fields. In the organic fields, fungal diversity increased with time since conversion. However, this effect disappeared when the conventional paired fields were included. There was a relationship between pH and soil organic matter content and the diversity and community composition of bacteria and fungi. In marine clay soils, when time since organic management increased, fungal communities in organic fields became more dissimilar to those in conventional fields. We conclude that conversion to organic management in these Dutch farmers' fields did not increase microbial community diversity. Instead, we observed that in organic fields in marine clay when time since conversion increased soil fungal community composition became progressively dissimilar from that in conventional fields. Our results also showed that the paired sampling approach of organic and conventional fields was essential in order to control for environmental variation that was otherwise unaccounted for.

Biodiversity and yield trade-offs for organic farming.

Organic farming supports higher biodiversity than conventional farming, but at the cost of lower yields. We conducted a meta-analysis quantifying the trade-off between biodiversity and yield, comparing conventional and organic farming. We developed a compatibility index to assess whether biodiversity gains from organic farming exceed yield losses, and a substitution index to assess whether organic farming would increase biodiversity in an area if maintaining total production under organic farming would require cultivating more land at the expense of nature. Overall, organic farming had 23% gain in biodiversity with a similar cost of yield decline. Biodiversity gain is negatively correlated to yield loss for microbes and plants, but no correlation was found for other taxa. The biodiversity and yield trade-off varies under different contexts of organic farming. The overall compatibility index value was close to zero, with negative values for cereal crops, positive for non-cereal crops, and varies across taxa. Our results indicate that, on average, the proportion of biodiversity gain is similar to the proportion of yield loss for paired field studies. For some taxa in non-cereal crops, switching to organic farming can lead to a biodiversity gain without yield loss. We calculated the overall value of substitution index and further discussed the application of this index to evaluate when the biodiversity of less intensified farming system is advantageous.

Turnover and nestedness drive plant diversity benefits of organic farming from local to landscape scales.

Biodiversity-benefits of organic farming have mostly been documented at the field scale. However, these benefits from organic farming to species diversity may not propagate to larger scales because variation in the management of different crop types and seminatural habitats in conventional farms might allow species to cope with intensive crop management. We studied flowering plant communities using a spatially replicated design in different habitats (cereal, ley and seminatural grasslands) in organic and conventional farms, distributed along a gradient in proportion of seminatural grasslands. We developed a novel method to compare the rates of species turnover within and between habitats, and between the total species pools in the two farming systems. We found that the intrahabitat species turnover did not differ between organic and conventional farms, but that organic farms had a significantly higher interhabitat turnover of flowering plant species compared with conventional ones. This was mainly driven by herbicide-sensitive species in cereal fields in organic farms, as these contained 2.5 times more species exclusive to cereal fields compared with conventional farms. The farm-scale species richness of flowering plants was higher in organic compared with conventional farms, but only in simple landscapes. At the interfarm level, we found that 36% of species were shared between the two farming systems, 37% were specific to organic farms whereas 27% were specific to conventional ones. Therefore, our results suggest that that both community nestedness and species turnover drive changes in species composition between the two farming systems. These large-scale shifts in species composition were driven by both species-specific herbicide and nitrogen sensitivity of plants. Our study demonstrates that organic farming should foster a diversity of flowering plant species from local to landscape scales, by promoting unique sets of arable-adapted species that are scarce in conventional systems. In terms of biodiversity conservation, our results call for promoting organic farming over large spatial extents, especially in simple landscapes, where such transitions would benefit plant diversity most.

The measurement of competitiveness of forest green food industry in Yunnan Province.

Improvement in living standards has led to the development and utilization of forest green foods. The study seeks to examine the foundation and potential of forest green food industry in Yunnan Province. By constructing the industrial competitive advantage model, this paper measured and analyzed the competitiveness of forest green food industry in Yunnan Province from 2016 to 2020 by using fuzzy evaluation method and AHP. The conclusions were as follows: (1) The competitiveness of forest green food industry in Yunnan Province was at a medium level with competitiveness index of 83.98. (2) The competitive advantage of forest green food industry in Yunnan Province mainly depended on key factors such as natural endowment and education level. The area is however not having comparative advantage in general factors and important factors. Therefore, there is the need to put in place measures to realise the full potential of forest green food industry in the area by providing players in the sector with requisite skills.

Bamboo-derived carboxymethyl cellulose for liquid film as renewable and biodegradable agriculture mulching.

Mulching has been extensively sought after in modern agriculture. However, massive utilization of plastics for mulching has induced severe environmental concerns. Developing biodegradable mulch thus represents an emerging need for future agriculture. By using bamboo-derived carboxymethyl cellulose (CMC), this study proposed a crosslinking strategy to prepare liquid film as quality mulch. CMC was synthesized by delignifying bamboo and etherifying resultant cellulose, which was then blended with polyvinyl alcohol (PVA) and crosslinked by glutaraldehyde to prepare a liquid film. By simply spraying on soil, mulch can quickly form on soil surface. Especially, bamboo-timber derived mulch had strong mechanical property (18.2 MPa), good transmittance (74.2%) and moisture absorption (141%), and excellent soil moisture retention. More importantly, about 64% of used mulches were biodegraded within 60-d after burring in soil, which will not need post-handling. These results highlighted that bamboo-derived mulch can be an alternative of current plastic mulch to tackle associated environmental pollution.

Physicochemical and Biological Indicators of Soils in an Organic Farming System.

In developed countries, the ideas of ecological agricultural production, continuous cycle, and waste-free production technologies have gained popularity. The effect from the production and consumption of ecological agricultural products is determined by the least harm to the environment, increasing the competitiveness of products, and receiving additional profit from increasing prices for higher quality products. The production of organically safe products is based on the principle of biologization, i.e., the widespread use of biological preparations, a high proportion of legumes (sources of nitrogen), and avoiding chemical plant protection products, transgenic plants, and genetically modified organisms (GMOs). This study aims to increase the productivity of safflower and improve the physicochemical and biological indicators of dark chestnut soils through the use of biologized technologies in the organic farming system. Standard methods for assessment and statistical analysis of physical and chemical parameters of soils were carried out in zone 1 of West Kazakhstan. This made it possible to identify the most optimal technology for the cultivation of safflower. The study results showed that under the influence of the phytomeliorative action of safflower in the 0-20 cm layer of dark chestnut soils, one could note an increase in the content of nitrate nitrogen by 5.95%, an increase in the content of mobile phosphorus by 5.22%, and soil loosening by 0.010 g/cm3, with the structure of the soil being 64.43%. Strong biological activity of the soil was established by the crops of safflower. The highest yield of safflower oil about 0.23 t/ha with an oil content of 30.1% was obtained using the biologized technology option. The use of biological technology, along with biological yields, increases oil yield by 0.06 t/ha or 28.06%.

Detection of Toxoplasma gondii oocysts on organic and conventionally grown produce.

Toxoplasma gondii infection can result in toxoplasmosis and potential psychological effects. Research commonly focuses on infection through contact with cat fecal matter or consumption of contaminated meat. However, T. gondii oocysts can persist in the environment for years and may be present in soils and on soil-grown produce. Rates of oocyst DNA recovery from produce were high, with 18% of vegetable samples testing positive for T. gondii via PCR test and melt curve analysis. Radishes had significantly higher oocyst counts than arugula, collard greens, kale, lettuce, and spinach. There were no significant differences in oocyst detection rates between samples taken from organic farmer's markets and conventional grocery stores. This study demonstrates that these oocysts can transfer to produce grown both conventionally and using organic techniques.

Field Borders Provide Winter Refuge for Beneficial Predators and Parasitoids: A Case Study on Organic Farms.

Semi-natural field borders are frequently used in midwestern U.S. sustainable agriculture. These habitats are meant to help diversify otherwise monocultural landscapes and provision them with ecosystem services, including biological control. Predatory and parasitic arthropods (i.e., potential natural enemies) often flourish in these habitats and may move into crops to help control pests. However, detailed information on the capacity of semi-natural field borders for providing overwintering refuge for these arthropods is poorly understood. In this study, we used soil emergence tents to characterize potential natural enemy communities (i.e., predacious beetles, wasps, spiders, and other arthropods) overwintering in cultivated organic crop fields and adjacent field borders. We found a greater abundance, species richness, and unique community composition of predatory and parasitic arthropods in field borders compared to arable crop fields, which were generally poorly suited as overwintering habitat. Furthermore, potential natural enemies tended to be positively associated with forb cover and negatively associated with grass cover, suggesting that grassy field borders with less forb cover are less well-suited as winter refugia. These results demonstrate that semi-natural habitats like field borders may act as a source for many natural enemies on a year-to-year basis and are important for conserving arthropod diversity in agricultural landscapes.

Comparison of China's and the European Union's Approaches to Antimicrobial Stewardship in the Pork Industry.

Antimicrobial resistance (AMR) is a recognized global public health concern. Although the link between antimicrobial usage in food animals and AMR in humans is established, the detailed interactions are unclear. Antimicrobial stewardship (AMS) in livestock was first implemented in Europe with Sweden as the pioneer in 1986. Despite this head start, AMR is still an ongoing challenge for Europe. The European Union (EU) is an established agriculture producer, the second largest pork producer globally, and one of the largest markets for organic food. China is the global leader in both production and consumption of pork. China's rise in prosperity has led to an increase in its pork demand. Chinese producers commonly use antimicrobials during production for disease treatment and prevention to meet this increased demand. China's rising prosperity together with recent publicized food safety scandals, disease outbreaks in domestic livestock products, and increased AMR awareness have resulted in an increased willingness to pay and demand for organic food by Chinese consumers. Responding to the growing concerns of AMR by consumers and the World Health Organization (WHO), the Chinese government introduced a national pilot program in 2016 to reduce unnecessary antimicrobial use. Compared with China, the EU is a different entity as it is a political union comprising diverse countries and although it may have more experience in AMS, both entities face similar issues with AMR and increasing demand for organic food. Increased interest in organic food has arisen due to concerns about AMR, food safety, outbreaks of bacterial food contamination, and animal welfare. This article aims to compare the different AMS strategies employed by each entity, China and the EU, and how the increased demand for organic produce globally also influences the effort to reduce antimicrobial use in these entities' pork industries.

Comparison of deoxynivalenol and zearaleone concentration in conventional and organic cereal products in western Poland.

INTRODUCTION AND OBJECTIVE: Deoxynivalenol (DON, vomitoxin) and Zearalenone (ZEA) are mycotoxin contaminants of cereals and cereal products that pose a significant threat to food safety. The aim of the study was to investigate the occurrence of DON and ZEA in different organic and conventional unprocessed cereals and cereal products that are available on the Polish agricultural fields and market. A total of 78 unprocessed cereal and cereal product samples of organic and conventional production were sampled from agricultural fields situated in western Poland and from available on the Polish market packaged comercial products produced by different domestic manufacturers. All samples were analyzed for DON and ZEA by HPLC with fluorescence detection (HPLC-FLD). RESULTS: Results. Co-occurrence of DON was detected in cereals from the organic production system, the average content was 285.25 ± 134,04 µg kg -1 and from the conventional system - 373.71 ± 171,20 µg kg -1 , In flour from organic farming, the average DON content was 213.80 ± 151,28 µg kg -1, in conventional flour the average was 336.29 ± 188,90 µg kg -1. The range of DON concentrations in samples of cereal products from organic and conventional farms was detected in 26.3% and 31.6%, whereas the average concentrations of DON in cereal products was 199.60 ± 149.82 µg kg -1 and 387.67 ± 250.24 µg kg -1, respectively. CONCLUSIONS: Mycotoxins contamination seen in organic cereals and cereal products does not statistical differ from that witnessed in their conventional counterparts.

Selection of plant growth promoting rhizobacteria sharing suitable features to be commercially developed as biostimulant products.

Plant biostimulants (PBs) are an eco-friendly alternative to chemical fertilisers because of their minimal or null impact on human health and environment, while ensuring optimal nutrient uptake and increase of crop yield, quality and tolerance to abiotic stress. Although there is an increasing interest on microbial biostimulants, the optimal procedure to select and develop them as commercial products is still not well defined. This work proposes and validates a procedure to select the best plant growth promoting rhizobacteria (PGPR) as potential active ingredients of commercial PBs. The stepwise screening strategy was designed based on literature analysis and consists of six steps: (i) determination of the target crop and commercial strategy, (ii) selection of growth media for the isolation of microbial candidates, (iii) screening for traits giving major agronomical advantages, (iv) screening for traits related to product development, (v) characterisation of the mode of action of PGPR and (vi) assessment of plant growth efficacy. The strategy was validated using a case study: PGPR combined with humic acids to be applied on tomato plants. Among 200 bacterial strains isolated from tomato rhizosphere, 39 % were able to grow in presence of humic acids and shared the ability to solubilise phosphate. After the screening for traits related to product development, only 6 % of initial bacterial strains were sharing traits suitable for the further development as potential PBs. In fact, the selected bacterial strains were able to produce high cell mass and tolerated drought, aspects important for the mass production and formulation. These bacterial strains were not able to produce antibiotics, establish pathogenic interaction with plants and did not belong to bacterial species associated to human, animal and plant diseases. Most importantly, five of the selected bacterial strains were able to promote tomato seedling vigour in experiments carried out in vitro. These bacterial strains were furtherly characterised for their ability to colonize effectively tomato plant roots, produce phytohormones and solubilise soil minerals. This characterisation led to the selection of two candidates that showed the ability to promote tomato plant growth in experiments carried out in greenhouse conditions. Overall, this work provides a flow diagram for the selection of PGPR candidates to be successfully developed and commercialized as PBs. The validation of the flow diagram led to the selection of two bacterial strains belonging to Pantoea and Pseudomonas genera, potential active ingredients of new commercial PBs.

Isotope chemometrics determines farming methods and geographical origin of vegetables from Yangtze River Delta Region, China.

Shanghai city has encountered possible food fraud regarding the geographical mislabeling of vegetables for economic gain. A combination of δ13C, δ15N, δ2H and δ18O values and partial least squares discrimination analysis and support vector machine (SVM) methods were used for the first time to assess farming methods and determine the origin of vegetables from Shanghai city, Anhui and Zhejiang provinces. The results showed that 65.8% of Shanghai vegetables, 38.2% of Anhui vegetables and 23.6% of Zhejiang vegetables appeared to be grown using green or organic farming methods. The optimal discriminant model was obtained using SVM with a predictive accuracy of 100% for Shanghai vegetables. Zhejiang vegetables had a predictive accuracy of 91.7%, while it was difficult to distinguish Anhui vegetables from Shanghai or Zhejiang vegetables. Therefore, this study provided a useful method to identify vegetable farming methods and discriminate vegetables from Shanghai and Zhejiang.

Informe de Rotación Electiva

El presente informe tiene como propósito dar cuenta del trabajo realizado y los aprendizajes alcanzados durante el desarrollo de la rotación de elección libre. La misma ha sido llevada a cabo entre el 1 de marzo y el 31 de marzo de 2021 en el Programa Pro-Huerta, dependiente de la Agencia de Extensión Rural (AER) Junín del Instituto Nacional de Tecnología Agropecuaria (INTA). En las siguientes páginas se presentará la sede de rotación y la fundamentación relativa a la relevancia de la elección de la misma. Asimismo, se explicitarán los objetivos propuestos y las actividades desarrolladas a lo largo del mencionado período. Finalmente, se presentará una reflexión a partir de los aprendizajes logrados y los aportes que se intentó realizar tanto desde el campo de la nutrición y la soberanía alimentaria como desde la Educación y Promoción de la Salud. (AU)

Effect of Organic Food Intake on Nitrogen Stable Isotopes.

Food choices affect the isotopic composition of the body with each food item leaving its distinct isotopic imprint. The common view is that the natural abundance of the stable isotopes of nitrogen (expressed as δ15N) is higher in animals than in plants that constitute our contemporary diets. Higher δ15N is thus increasingly viewed as a biomarker for meat and fish intake. Here we show that organic compared to conventional farming increases plant δ15N to an extent that can appreciably impact the performance of δ15N as a biomarker. The error that can arise when organic plants are consumed was modelled for the entire range of proportions of plant versus animal protein intake, and accounting for various intakes of organic and conventionally grown crops. This mass balance model allows the interpretation of differences in δ15N in light of organic food consumption. Our approach shows that the relationship between δ15N and meat and fish intake is highly contextual and susceptible to variation at the population, community or group level. We recommend that fertilization practices and organic plant consumption must not be overlooked when using δ15N as a biomarker for meat and fish intake or to assess compliance to nutritional interventions.

Biopreparados para el control de enfermedades foliares de fresa, Pamplona, Colombia, aun una solución parcial / Biopreparations for the control of strawberry leaf diseases, Pamplona, Colombia, even a partial solution

OBJETIVO: El trabajo tuvo como objetivo determinar la eficacia de seis biopreparados locales para el control de las enfermedades foliares del cultivo de la fresa. MATERIALES Y MÉTODOS: Se condujo un experimento en la finca Camacho del municipio de Pamplona Norte de Santander, Colombia. Se utilizó un diseño de bloques al azar con nueve tratamientos, seis biopreparados locales, tres testigos (una saneado, uno sin sanear y un químico). RESULTADOS: Se identificaron como enfermedades foliares más importantes de la fresa a Ramularia tulasnei, Colletotrichum sp., Botrytis cinerea y Xanthomonas fragariae. Los biopreparados Caldo rizósfera y Microorganismos Eficientes (ME) resultaros superiores al tratamiento químico con mancozeb para la mancha por Ramularia. Los bioproductos Caldo Rizósfera y ME mostraron resultados similares que el control químico contra., la pudrición por Botrytis, la mancha por Xanthomonas, y la antracnosis en hojas, flores y frutos, pero los niveles de incidencia de esta enfermedad estuvieron entre 46 y 55 % en flores y entre 56 y 63 % en frutos. CONCLUSIONES: Los biopreparados Caldo Rizósfera y ME resultaros superiores al tratamiento químico con Dithane para mantener a la mancha por Ramularia en niveles de severidad aceptables, al igual que a la mancha bacteriana y la pudrición por Botrytis y resultaron similares que el control químico contra la antracnosis en hojas, flores y frutos, sin embargo, los niveles de incidencia en flores y frutos de la antracnosis no son los deseados, amenazando la rentabilidad del agricultor

OBJECTIVE: The work aimed to determine the efficacy of six local biopreparations for the control of leaf diseases of strawberry cultivation. MATERIALS AND METHODS: An experiment was conducted at the Camacho farm in the municipality of Pamplona Norte de Santander, Colombia. A randomized block design was used with nine treatments, six local biopreparations, three controls (one sanitized, one unsanitary and one chemical). RESULTS: The most important foliar diseases of the strawberry were Ramularia tulasnei, Colletotrichum sp., Botrytis cinerea and Xanthomonas fragariae. The biopreparations Rhizosphere Broth and Efficient Microorganisms (ME) are superior to the chemical treatment with mancozeb for the spot by Ramularia. The bio-products Rhizphere Broth and ME showed similar results that the chemical control against Botrytis rot, Xanthomonas spot, and anthracnose on leaves, flowers and fruits, but the incidence levels of this disease were between 46 and 55% in flowers and between 56 and 63% in fruits. CONCLUSIONS: The biopreparations Rhizphere Broth and ME were superior to the chemical treatment with Dithane to maintain the spot by Ramularia at acceptable levels of severity, as well as the bacterial spot and Botrytis rot, and although they were similar to the chemical control against anthracnose in leaves, flowers and fruits, however, the levels of incidence anthracnose in flowers and fruits are not desired, threatening the profitability of the farmer

Diversity and structure of prokaryotic communities within organic and conventional farming systems in central highlands of Kenya.

Management practices such as tillage, crop rotation, irrigation, organic and inorganic inputs application are known to influence diversity and function of soil microbial populations. In this study, we investigated the effect of conventional versus organic farming systems at low and high input levels on structure and diversity of prokaryotic microbial communities. Soil samples were collected from the ongoing long-term farming system comparison trials established in 2007 at Chuka and Thika in Kenya. Physicochemical parameters for each sample were analyzed. Total DNA and RNA amplicons of variable region (V4-V7) of the 16S rRNA gene were generated on an Illumina platform using the manufacturer's instructions. Diversity indices and statistical analysis were done using QIIME2 and R packages, respectively. A total of 29,778,886 high quality reads were obtained and assigned to 16,176 OTUs at 97% genetic distance across both 16S rDNA and 16S rRNA cDNA datasets. The results pointed out a histrionic difference in OTUs based on 16S rDNA and 16S rRNA cDNA. Precisely, while 16S rDNA clustered by site, 16S rRNA cDNA clustered by farming systems. In both sites and systems, dominant phylotypes were affiliated to phylum Actinobacteria, Proteobacteria and Acidobacteria. Conventional farming systems showed a higher species richness and diversity compared to organic farming systems, whilst 16S rRNA cDNA datasets were similar. Physiochemical factors were associated differently depending on rRNA and rDNA. Soil pH, electrical conductivity, organic carbon, nitrogen, potassium, aluminium, zinc, iron, boron and micro-aggregates showed a significant influence on the observed microbial diversity. The observed higher species diversity in the conventional farming systems can be attributed to the integration of synthetic and organic agricultural inputs. These results show that the type of inputs used in a farming system not only affect the soil chemistry but also the microbial population dynamics and eventually the functional roles of these microbes.

Comparison of the quality of cage and organic eggs available in retail and their content of selected macroelements.

BACKGROUND: The chicken egg is a food product with a rich content of nutrients, such as proteins, vitamins, lipids, and minerals with high bioavailability. Furthermore, eggs are easy to prepare and a relatively inexpensive component of the human diet. The aim of this study was to compare the quality of eggs from an organic and a conventional farm and their content of Na and K. METHODS: The research material consisted of eggs from laying hens reared in two different systems - organic (according to standards for organic farming and with access to a chicken run) and cage. Forty eggs from each group were analysed. Egg quality traits were divided into destructive and non-destructive. In addition, potassium (K) and sodium (Na) contents were determined in the whole egg, yolk and albumen. RESULTS: The research results indicated slightly better quality of eggs from organic farming compared to eggs from cages in the case of most physical properties. The data clearly show that the content of sodium and potassium in the albumen, yolk and whole egg was higher in the eggs of chickens raised organically compared to the eggs of chickens reared in cages (P ≤ 0.05). CONCLUSIONS: The research results indicate a slightly better quality of eggs from the organic farm compared to eggs from cages in the case of most physical properties, as well as the content of macro-elements. Eggs in both systems are produced following scientific management practices. There are many myths among consumers regarding the nutritional quality of eggs produced in different systems. This information can be useful for raising awareness among consumers selecting eggs.